Road to Becoming a Better Ninja, with my Brother?

The Overlord has been defeated! However, Cole learns that he's got a brother and that his mother is alive! However, they've been kidnapped by a new threat: Team Magnitude! Join Cole and Brad as they learn the enemies and the world of Pokémon. It's pretty well-known that Ash and Paul don't get along. Hey, they might not have a choice. AU. Chapter 4 is up. WILL UNDERGO REWRITE.